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CONCUR
2009
Springer
13 years 5 months ago
BlenX Static and Dynamic Semantics
We introduce a new programming language called BlenX. It is strongly inspired to process calculi and it is an evolution of Betabinders. It has been specifically designed and implem...
Corrado Priami, Paola Quaglia, Alessandro Romanel
CCGRID
2004
IEEE
13 years 11 months ago
Molecular structure determination on a computational and data Grid
The focus of this paper is on the design and implementation of a critical program in structural biology onto two computational and data grids. The first is the Buffalo-based ACDC ...
Mark L. Green, Russ Miller
JCC
2008
84views more  JCC 2008»
13 years 7 months ago
Explicit ion, implicit water solvation for molecular dynamics of nucleic acids and highly charged molecules
: An explicit ion, implicit water solvent model for molecular dynamics was developed and tested with DNA and RNA simulations. The implicit water model uses the finite difference Po...
Ninad V. Prabhu, Manoranjan Panda, Qingyi Yang, Ki...
JCPHY
2011
192views more  JCPHY 2011»
12 years 10 months ago
Fast analysis of molecular dynamics trajectories with graphics processing units - Radial distribution function histogramming
The calculation of radial distribution functions (RDFs) from molecular dynamics trajectory data is a common and computationally expensive analysis task. The rate limiting step in ...
Benjamin G. Levine, John E. Stone, Axel Kohlmeyer
SC
2000
ACM
13 years 12 months ago
A Wrapper Generator for Wrapping High Performance Legacy Codes as Java/CORBA Components
This paper describes a Wrapper Generator for wrapping high performance legacy codes as Java/CORBA components for use in a distributed component-based problemsolving environment. U...
Maozhen Li, Omer F. Rana, Matthew S. Shields, Davi...