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IPPS
2009
IEEE
14 years 3 months ago
Exploring FPGAs for accelerating the phylogenetic likelihood function
Driven by novel biological wet lab techniques such as pyrosequencing there has been an unprecedented molecular data explosion over the last 2-3 years. The growth of biological seq...
Nikolaos Alachiotis, Euripides Sotiriades, Apostol...
JASSS
1998
82views more  JASSS 1998»
13 years 8 months ago
Qualitative modeling and simulation of socio-economic phenomena
This paper describes an application of recently developed qualitative reasoning techniques to complex, socio{economic allocation problems. We explain why we believe traditional op...
Giorgio Brajnik, Marji Lines
SIGMETRICS
1994
ACM
113views Hardware» more  SIGMETRICS 1994»
14 years 27 days ago
Shade: A Fast Instruction-Set Simulator for Execution Profiling
Shade is an instruction-set simulator and custom trace generator. Application programs are executed and traced under the control of a user-supplied trace analyzer. To reduce commu...
Robert F. Cmelik, David Keppel
JCC
2008
92views more  JCC 2008»
13 years 8 months ago
Fast procedure for reconstruction of full-atom protein models from reduced representations
: We introduce PULCHRA, a fast and robust method for the reconstruction of full-atom protein models starting from a reduced protein representation. The algorithm is particularly su...
Piotr Rotkiewicz, Jeffrey Skolnick
ISCAPDCS
2003
13 years 10 months ago
Dynamic Simultaneous Multithreaded Architecture
This paper presents the Dynamic Simultaneous Multithreaded Architecture (DSMT). DSMT efficiently executes multiple threads from a single program on a SMT processor core. To accomp...
Daniel Ortiz Arroyo, Ben Lee