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102
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CCGRID
2006
IEEE
15 years 8 months ago
Using Multiple Grid Resources for Bioinformatics Applications in GADU
During the past decade, the scientific community has witnessed the rapid accumulation of gene sequence data and data related to physiology and biochemistry of organisms. Bioinform...
Dinanath Sulakhe, Alex Rodriguez, Michael Wilde, I...
96
Voted
CVPR
2007
IEEE
15 years 8 months ago
Visual Event Recognition in News Video using Kernel Methods with Multi-Level Temporal Alignment
In this work, we systematically study the problem of visual event recognition in unconstrained news video sequences. We adopt the discriminative kernel-based method for which vide...
Dong Xu, Shih-Fu Chang
122
Voted
ICSM
2007
IEEE
15 years 8 months ago
A Maintainable Software Architecture for Fast and Modular Bioinformatics Sequence Search
Bioinformaticists use the Basic Local Alignment Search Tool (BLAST) to characterize an unknown sequence by comparing it against a database of known sequences, thus detecting evolu...
Jeremy S. Archuleta, Eli Tilevich, Wu-chun Feng
131
Voted
IPPS
2009
IEEE
15 years 9 months ago
Accelerating HMMer on FPGAs using systolic array based architecture
HMMer is a widely-used bioinformatics software package that uses profile HMMs (Hidden Markov Models) to model the primary structure consensus of a family of protein or nucleic aci...
Yanteng Sun, Peng Li, Guochang Gu, Yuan Wen, Yuan ...
IPPS
2005
IEEE
15 years 8 months ago
High-Performance Direct Pairwise Comparison of Large Genomic Sequences
Many applications in Comparative Genomics lend themselves to implementations that take advantage of common high-performance features in modern microprocessors. However, the common...
Christopher Mueller, Mehmet M. Dalkilic, Andrew Lu...