Adapting to the network is the key to achieving high performance for communication-intensive applications, including scientific computing, data intensive computing, and multicast...
—In this paper, we investigate data parallelism in exact inference with respect to arbitrary junction trees. Exact inference is a key problem in exploring probabilistic graphical...
We present a scalable parallel implementation for converting a Bayesian network to a junction tree, which can then be used for a complete parallel implementation for exact inferen...
Background: Sequence alignments form part of many investigations in molecular biology, including the determination of phylogenetic relationships, the prediction of protein structu...
Pierre M. Durand, Scott Hazelhurst, Theresa L. Coe...
In this paper, we present an algorithm to simultaneously align three biological sequences with affine gap model and infer their common ancestral sequence. Our algorithm can be fu...