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BMCBI
2008
118views more  BMCBI 2008»
13 years 7 months ago
DOVIS: an implementation for high-throughput virtual screening using AutoDock
Background: Molecular-docking-based virtual screening is an important tool in drug discovery that is used to significantly reduce the number of possible chemical compounds to be i...
Shuxing Zhang, Kamal Kumar, Xiaohui Jiang, Anders ...
MIDDLEWARE
2004
Springer
14 years 1 months ago
Foreseer: A Novel, Locality-Aware Peer-to-Peer System Architecture for Keyword Searches
Peer-to-peer (P2P) systems are becoming increasingly popular and complex, serving millions of users today. However, the design of current unstructured P2P systems does not take ful...
Hailong Cai, Jun Wang
VLDB
2001
ACM
139views Database» more  VLDB 2001»
14 years 4 days ago
NetCube: A Scalable Tool for Fast Data Mining and Compression
We propose an novel method of computing and storing DataCubes. Our idea is to use Bayesian Networks, which can generate approximate counts for any query combination of attribute v...
Dimitris Margaritis, Christos Faloutsos, Sebastian...
BMCBI
2010
142views more  BMCBI 2010»
13 years 7 months ago
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Background: Likelihood-based phylogenetic inference is generally considered to be the most reliable classification method for unknown sequences. However, traditional likelihood-ba...
Frederick A. Matsen III, Robin B. Kodner, E. Virgi...
BMCBI
2004
150views more  BMCBI 2004»
13 years 7 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz