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IPPS
2007
IEEE
14 years 4 months ago
Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application
This paper presents the optimization and evaluation of parallel I/O for the BIPS3D parallel irregular application, a 3-dimensional simulation of BJT and HBT bipolar devices. The p...
Rosa Filgueira, David E. Singh, Florin Isaila, Jes...
HPDC
2010
IEEE
13 years 11 months ago
LogGOPSim: simulating large-scale applications in the LogGOPS model
We introduce LogGOPSim--a fast simulation framework for parallel algorithms at large-scale. LogGOPSim utilizes a slightly extended version of the well-known LogGPS model in combin...
Torsten Hoefler, Timo Schneider, Andrew Lumsdaine
IPPS
1999
IEEE
14 years 2 months ago
Large Scale Simulation of Parallel Molecular Dynamics
This paper aims to describe the implementation of TAKAKAW, an efficient parallel application for the simulation of molecular dynamics designed to handle large proteins in biology....
Pierre-Eric Bernard, Thierry Gautier, Denis Trystr...
WSC
2008
14 years 3 days ago
Parallel discrete-event simulation of population dynamics
Research in parallel simulation has been around for more than two decades. However, the number of papers reporting on its application to real world problems is limited. At the 200...
Bhakti Satyabudhi, Stephan Onggo
ISCAPDCS
2007
13 years 11 months ago
Architectural requirements of parallel computational biology applications with explicit instruction level parallelism
—The tremendous growth in the information culture, efficient digital searches are needed to extract and identify information from huge data. The notion that evolution in silicon ...
Naeem Zafar Azeemi