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BMCBI
2011
13 years 11 days ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
CIDR
2007
208views Algorithms» more  CIDR 2007»
13 years 10 months ago
Impliance: A Next Generation Information Management Appliance
Though database technology has been remarkably successful in building a large market and adapting to the changes of the last three decades, its impact on the broader market of inf...
Bishwaranjan Bhattacharjee, Joseph S. Glider, Rich...
CLUSTER
2007
IEEE
14 years 3 months ago
Anomaly localization in large-scale clusters
— A critical problem facing by managing large-scale clusters is to identify the location of problems in a system in case of unusual events. As the scale of high performance compu...
Ziming Zheng, Yawei Li, Zhiling Lan
ICAIL
2007
ACM
14 years 19 days ago
Essential deduplication functions for transactional databases in law firms
As massive document repositories and knowledge management systems continue to expand, in proprietary environments as well as on the Web, the need for duplicate detection becomes i...
Jack G. Conrad, Edward L. Raymond
IPPS
2007
IEEE
14 years 3 months ago
RNAVLab: A unified environment for computational RNA structure analysis based on grid computing technology
Ribonucleic acid (RNA) molecules play important roles in many biological processes including gene expression and regulation. An RNA molecule is a linear polymer which folds back o...
Michela Taufer, Ming-Ying Leung, Kyle L. Johnson, ...