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WABI
2009
Springer
162views Bioinformatics» more  WABI 2009»
14 years 2 months ago
Aligning Biomolecular Networks Using Modular Graph Kernels
Comparative analysis of biomolecular networks constructed using measurements from different conditions, tissues, and organisms offer a powerful approach to understanding the stru...
Fadi Towfic, M. Heather West Greenlee, Vasant Hona...
IPPS
2002
IEEE
14 years 19 days ago
Massively Parallel Solutions for Molecular Sequence Analysis
In this paper we present new approaches to high performance protein database scanning on two novel massively parallel architectures to gain supercomputer power at low cost. The ï¬...
Bertil Schmidt, Heiko Schröder, Manfred Schim...
IPPS
1995
IEEE
13 years 11 months ago
Symbolic range propagation
Abstract. To e ectively parallelize real programs, parallelizing compilers need powerful symbolic analysis techniques 13, 6 . In previous work we have introduced an algorithm calle...
William Blume, Rudolf Eigenmann
CORR
2011
Springer
124views Education» more  CORR 2011»
13 years 2 months ago
Parallel Recursive State Compression for Free
This paper focuses on reducing memory usage in enumerative model checking, while maintaining the multi-core scalability obtained in earlier work. We present a multi-core tree-based...
Alfons Laarman, Jaco van de Pol, Michael Weber 000...
SCHOLARPEDIA
2011
12 years 10 months ago
N-body simulations
Abstract. Scientists’ ability to generate and collect massive-scale datasets is increasing. As a result, constraints in data analysis capability rather than limitations in the av...