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ICCSA
2004
Springer
14 years 4 months ago
A Sequence-Focused Parallelisation of EMBOSS on a Cluster of Workstations
Abstract. A number of individual bioinformatics applications (particularly BLAST and other sequence searching methods) have recently been implemented over clusters of workstations ...
Karl Podesta, Martin Crane, Heather J. Ruskin
CLUSTER
2006
IEEE
14 years 4 months ago
Designing High Performance and Scalable MPI Intra-node Communication Support for Clusters
As new processor and memory architectures advance, clusters start to be built from larger SMP systems, which makes MPI intra-node communication a critical issue in high performanc...
Lei Chai, Albert Hartono, Dhabaleswar K. Panda
PPOPP
2010
ACM
14 years 8 months ago
A distributed placement service for graph-structured and tree-structured data
Effective data placement strategies can enhance the performance of data-intensive applications implemented on high end computing clusters. Such strategies can have a significant i...
Gregory Buehrer, Srinivasan Parthasarathy, Shirish...
CLUSTER
2002
IEEE
13 years 10 months ago
ZENTURIO: An Experiment Management System for Cluster and Grid Computing
The need to conduct and manage large sets of experiments for scientific applications dramatically increased over the last decade. However, there is still very little tool support ...
Radu Prodan, Thomas Fahringer
IPPS
1999
IEEE
14 years 3 months ago
Parallel Algorithms for 3D Reconstruction of Asymmetric Objects from Electron Micrographs
We present new parallel algorithms for 3D reconstruction of objects from 2D projections and their application for the determination of the structure of macromolecules from electro...
Robert E. Lynch, Dan C. Marinescu, Hong Lin, Timot...