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IAJIT
2006
109views more  IAJIT 2006»
13 years 8 months ago
Unconstraint Assignment Problem: A Molecular Computing Approach
: Deoxyribonucleic Acid or DNA-based computing is an emerging field that bridging the gap between chemistry, molecular biology, computer science, and mathematics. This research are...
Zuwairie Ibrahim, Yusei Tsuboi, Osamu Ono, Marzuki...
BMCBI
2010
125views more  BMCBI 2010»
13 years 8 months ago
Large-scale prediction of protein-protein interactions from structures
Background: The prediction of protein-protein interactions is an important step toward the elucidation of protein functions and the understanding of the molecular mechanisms insid...
Martial Hue, Michael Riffle, Jean-Philippe Vert, W...
WSC
1998
13 years 10 months ago
Parallel Implementation of a Molecular Dynamics Simulation Program
We have taken a NIST molecular dynamics simulation program (md3), which was configured as a single sequential process running on a CRAY C90 vector supercomputer, and parallelized ...
Alan Mink, Christophe Bailly
BMCBI
2010
175views more  BMCBI 2010»
13 years 8 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
DNA
2004
Springer
14 years 2 months ago
Efficient Initial Pool Generation for Weighted Graph Problems Using Parallel Overlap Assembly
Most DNA computing algorithms for mathematical problems start with combinatorial generation of an initial pool. Several methods for initialpool generation have been proposed, inclu...
Ji Youn Lee, Hee-Woong Lim, Suk-In Yoo, Byoung-Tak...