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BCB
2010
156views Bioinformatics» more  BCB 2010»
13 years 5 months ago
Accelerating HMMER on GPUs by implementing hybrid data and task parallelism
Many biologically motivated problems are expressed as dynamic programming recurrences and are difficult to parallelize due to the intrinsic data dependencies in their algorithms. ...
Narayan Ganesan, Roger D. Chamberlain, Jeremy Buhl...
ASPLOS
2004
ACM
14 years 3 months ago
Programming with transactional coherence and consistency (TCC)
Transactional Coherence and Consistency (TCC) offers a way to simplify parallel programming by executing all code within transactions. In TCC systems, transactions serve as the fu...
Lance Hammond, Brian D. Carlstrom, Vicky Wong, Ben...
EUROPAR
1995
Springer
14 years 1 months ago
Relating Data-Parallelism and (And-) Parallelism in Logic Programs
Much work has been done in the areas of and–parallelism and data parallelism in Logic Programs. Such work has proceeded to a certain extent in an independent fashion. Both types...
Manuel V. Hermenegildo, Manuel Carro
ICPADS
2000
IEEE
14 years 2 months ago
Object-Oriented Real-Time Distributed Programming and Support Middleware
Abstract: The object-oriented (OO) distributed realtime (RT) programming movement started in 1990's and is growing rapidly at this turn of the century. The motivations are rev...
K. H. Kim
CL
2007
Springer
13 years 10 months ago
Skeleton-based parallel programming: Functional and parallel semantics in a single shot
Semanticsofskeleton-basedparallelprogramminglanguagescomesusuallyastwodistinctitems:afunctionalsemantics,modeling the function computed by the skeleton program, and a parallel sem...
Marco Aldinucci, Marco Danelutto