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» Parallelism in Gene Assembly
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BMCBI
2006
138views more  BMCBI 2006»
13 years 7 months ago
Approximation properties of haplotype tagging
Background: Single nucleotide polymorphisms (SNPs) are locations at which the genomic sequences of population members differ. Since these differences are known to follow patterns,...
Staal A. Vinterbo, Stephan Dreiseitl, Lucila Ohno-...
JCB
2008
159views more  JCB 2008»
13 years 7 months ago
BayesMD: Flexible Biological Modeling for Motif Discovery
We present BayesMD, a Bayesian Motif Discovery model with several new features. Three different types of biological a priori knowledge are built into the framework in a modular fa...
Man-Hung Eric Tang, Anders Krogh, Ole Winther
BMCBI
2005
122views more  BMCBI 2005»
13 years 7 months ago
FACT - a framework for the functional interpretation of high-throughput experiments
Background: Interpreting the results of high-throughput experiments, such as those obtained from DNA-microarrays, is an often time-consuming task due to the high number of data-po...
Felix Kokocinski, Nicolas Delhomme, Gunnar Wrobel,...
MICCAI
2009
Springer
14 years 8 months ago
Think Global, Act Local; Projectome Estimation with BlueMatter
Estimating the complete set of white matter fascicles (the projectome) from diffusion data requires evaluating an enormous number of potential pathways; consequently, most algorith...
Anthony Sherbondy, Robert Dougherty, Rajagopal A...
OOPSLA
2009
Springer
14 years 1 months ago
Grace: safe multithreaded programming for C/C++
The shift from single to multiple core architectures means that programmers must write concurrent, multithreaded programs in order to increase application performance. Unfortunate...
Emery D. Berger, Ting Yang, Tongping Liu, Gene Nov...