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IPPS
2007
IEEE
14 years 2 months ago
Software and Algorithms for Graph Queries on Multithreaded Architectures
Search-based graph queries, such as finding short paths and isomorphic subgraphs, are dominated by memory latency. If input graphs can be partitioned appropriately, large cluster...
Jonathan W. Berry, Bruce Hendrickson, Simon Kahan,...
ICSM
2007
IEEE
14 years 2 months ago
A Maintainable Software Architecture for Fast and Modular Bioinformatics Sequence Search
Bioinformaticists use the Basic Local Alignment Search Tool (BLAST) to characterize an unknown sequence by comparing it against a database of known sequences, thus detecting evolu...
Jeremy S. Archuleta, Eli Tilevich, Wu-chun Feng
ICPP
2008
IEEE
14 years 2 months ago
Enabling Streaming Remoting on Embedded Dual-Core Processors
Dual-core processors (and, to an extent, multicore processors) have been adopted in recent years to provide platforms that satisfy the performance requirements of popular multimed...
Kun-Yuan Hsieh, Yen-Chih Liu, Po-Wen Wu, Shou-Wei ...
IPPS
2003
IEEE
14 years 1 months ago
Performing DNA Comparison on a Bio-Inspired Tissue of FPGAs
String comparison is a critical issue in many application domains, including speech recognition, contents search, and bioinformatics. The similarity between two strings of lengths...
Matteo Canella, Filippo Miglioli, Alessandro Bogli...
VLSID
2008
IEEE
166views VLSI» more  VLSID 2008»
14 years 8 months ago
Exploring the Processor and ISA Design for Wireless Sensor Network Applications
Power consumption, physical size, and architecture design of sensor node processors have been the focus of sensor network research in the architecture community. What lies at the ...
Shashidhar Mysore, Banit Agrawal, Frederic T. Chon...