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COCOON
2008
Springer
13 years 9 months ago
Haplotype Inferring Via Galled-Tree Networks Is NP-Complete
The problem of determining haplotypes from genotypes has gained considerable prominence in the research community since the beginning of the HapMap project. Here the focus is on de...
Arvind Gupta, Ján Manuch, Ladislav Stacho, ...
BMCBI
2008
96views more  BMCBI 2008»
13 years 8 months ago
Novel methodology for construction and pruning of quasi-median networks
Background: Visualising the evolutionary history of a set of sequences is a challenge for molecular phylogenetics. One approach is to use undirected graphs, such as median network...
Sarah C. Ayling, Terence A. Brown
BMCBI
2010
108views more  BMCBI 2010»
13 years 7 months ago
iGTP: A software package for large-scale gene tree parsimony analysis
Background: The ever-increasing wealth of genomic sequence information provides an unprecedented opportunity for large-scale phylogenetic analysis. However, species phylogeny infe...
Ruchi Chaudhary, Mukul S. Bansal, André Weh...
CF
2006
ACM
14 years 1 months ago
Memory efficient parallel matrix multiplication operation for irregular problems
Regular distributions for storing dense matrices on parallel systems are not always used in practice. In many scientific applicati RUMMA) [1] to handle irregularly distributed mat...
Manojkumar Krishnan, Jarek Nieplocha
CEC
2008
IEEE
14 years 2 months ago
A parallel surrogate-assisted multi-objective evolutionary algorithm for computationally expensive optimization problems
Abstract— This paper presents a new efficient multiobjective evolutionary algorithm for solving computationallyintensive optimization problems. To support a high degree of parall...
Anna Syberfeldt, Henrik Grimm, Amos Ng, Robert Ivo...