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IPPS
2000
IEEE
14 years 6 days ago
Parallelizability of Some P-Complete Problems
Abstract. In this paper, we consider parallelizability of some Pcomplete problems. First we propose a parameter which indicates parallelizability for a convex layers problem. We pr...
Akihiro Fujiwara, Michiko Inoue, Toshimitsu Masuza...
RECOMB
2005
Springer
14 years 8 months ago
Lower Bounds for Maximum Parsimony with Gene Order Data
Abstract. In this paper, we study lower bound techniques for branchand-bound algorithms for maximum parsimony, with a focus on gene order data. We give a simple O(n3 ) time dynamic...
Abraham Bachrach, Kevin Chen, Chris Harrelson, Rad...
CANDC
2005
ACM
13 years 7 months ago
Integer linear programming as a tool for constructing trees from quartet data
The task of the quartet puzzling problem is to find a best-fitting binary X-tree for a finite n-set from confidence values for the 3 n 4 binary trees with exactly four leaves from...
Jan Weyer-Menkhoff, Claudine Devauchelle, Alexande...
SPDP
1991
IEEE
13 years 11 months ago
Asynchronous parallel search by the parallel genetic algorithm
The parallel genetic algorithm (PGA) is a prototype of a new kind of a distributed algorithm. It is based on a parallel search by individuals all of which have the complete proble...
Heinz Mühlenbein
IPPS
2003
IEEE
14 years 1 months ago
A BSP/CGM Algorithm for the All-Substrings Longest Common Subsequence Problem
Given two strings and of lengths Ñ and Ò, respectively, the all-substrings longest common subsequence (ALCS) problem obtains the lengths of the subsequences common to and any su...
Carlos E. R. Alves, Edson Cáceres, Siang W....