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SAC
2010
ACM
13 years 8 months ago
FANGS: high speed sequence mapping for next generation sequencers
Next Generation Sequencing machines are generating millions of short DNA sequences (reads) everyday. There is a need for efficient algorithms to map these sequences to the referen...
Sanchit Misra, Ramanathan Narayanan, Simon Lin, Al...
ICASSP
2010
IEEE
13 years 8 months ago
Histogram equalization and noise masking for robust speech recognition
Mismatch between training and test conditions deteriorates the performance of speech recognizers. This paper investigates the combination of parametric histogram equalization (pHE...
Xueru Zhang, Kris Demuynck, Hugo Van Hamme
PVLDB
2008
201views more  PVLDB 2008»
13 years 7 months ago
Ed-Join: an efficient algorithm for similarity joins with edit distance constraints
There has been considerable interest in similarity join in the research community recently. Similarity join is a fundamental operation in many application areas, such as data inte...
Chuan Xiao, Wei Wang 0011, Xuemin Lin
IPPS
2010
IEEE
13 years 5 months ago
pFANGS: Parallel high speed sequence mapping for Next Generation 454-roche Sequencing reads
Millions of DNA sequences (reads) are generated by Next Generation Sequencing machines everyday. There is a need for high performance algorithms to map these sequences to the refer...
Sanchit Misra, Ramanathan Narayanan, Wei-keng Liao...
IPPS
2005
IEEE
14 years 1 months ago
Virtual Gateways in the DECOS Integrated Architecture
— The DECOS architecture aims at combining the advantages of federated and integrated systems. The DECOS architecture divides the overall system into a set of nearly-independent ...
Roman Obermaisser, Philipp Peti, Hermann Kopetz