115 search results - page 11 / 23 » Parameters for accurate genome alignment |
BMCBI
2008
13 years 7 months ago
2008
Background: Accurate annotation of translation initiation sites (TISs) is essential for understanding the translation initiation mechanism. However, the reliability of TIS annotat...
CIBB
2008
13 years 9 months ago
2008
Abstract. We evaluated methods of protein classification that use kernels built from BLAST output parameters. Protein sequences were represented as vectors of parameters (e.g. simi...
JCB
2008
13 years 7 months ago
2008
A novel approach to the detection of genomic repeats is presented in this paper. The technique, dubbed SAGRI (Spectrum Assisted Genomic Repeat Identifier), is based on the spectru...
BMCBI
2008
13 years 7 months ago
2008
Background: To meet the needs of gene annotation for newly sequenced organisms, optimized spaced seeds can be implemented into cross-species sequence alignment programs to accurat...
RECOMB
2001
Springer
14 years 7 months ago
2001
Springer
Phylogenetic footprinting is a comparative genomics approach for predicting transcription factor binding sites, where a set of orthologous regulatory regions are compared and short...