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CORR
2010
Springer
83views Education» more  CORR 2010»
13 years 8 months ago
Sentence Simplification Aids Protein-Protein Interaction Extraction
Accurate systems for extracting ProteinProtein Interactions (PPIs) automatically from biomedical articles can help accelerate biomedical research. Biomedical Informatics researche...
Siddhartha Jonnalagadda, Graciela Gonzalez
ACL
2008
13 years 10 months ago
Task-oriented Evaluation of Syntactic Parsers and Their Representations
This paper presents a comparative evaluation of several state-of-the-art English parsers based on different frameworks. Our approach is to measure the impact of each parser when i...
Yusuke Miyao, Rune Sætre, Kenji Sagae, Takuy...
BMCBI
2010
133views more  BMCBI 2010»
13 years 8 months ago
Learning an enriched representation from unlabeled data for protein-protein interaction extraction
Background: Extracting protein-protein interactions from biomedical literature is an important task in biomedical text mining. Supervised machine learning methods have been used w...
Yanpeng Li, Xiaohua Hu, Hongfei Lin, Zhihao Yang
BMCBI
2002
110views more  BMCBI 2002»
13 years 8 months ago
Identifying functional relationships among human genes by systematic analysis of biological literature
Background: The availability of biomedical literature in electronic format has made it possible to implement automatic text processing methods to expose implicit relationships amo...
Yong-Chuan Tao, Rudolph L. Leibel
BMCBI
2008
153views more  BMCBI 2008»
13 years 8 months ago
GAPscreener: An automatic tool for screening human genetic association literature in PubMed using the support vector machine tec
Background: Synthesis of data from published human genetic association studies is a critical step in the translation of human genome discoveries into health applications. Although...
Wei Yu, Melinda Clyne, Siobhan M. Dolan, Ajay Yesu...