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BMCBI
2010
101views more  BMCBI 2010»
13 years 8 months ago
Hidden Markov model speed heuristic and iterative HMM search procedure
Background: Profile hidden Markov models (profile-HMMs) are sensitive tools for remote protein homology detection, but the main scoring algorithms, Viterbi or Forward, require con...
L. Steven Johnson, Sean R. Eddy, Elon Portugaly
PPOPP
1997
ACM
14 years 3 hour ago
Shared Memory Performance Profiling
This paper describes a new approach to finding performance bottlenecks in shared-memory parallel programs and its embodiment in the Paradyn Parallel Performance Tools running with...
Zhichen Xu, James R. Larus, Barton P. Miller
ACSAC
1998
IEEE
14 years 22 days ago
How to Increase Security in Mobile Networks by Anomaly Detection
The increasing complexity of cellular radio networks yields new demands concerning network security. Especially the task of detecting, repulsing and preventing abuse both by in- a...
Roland Büschkes, Dogan Kesdogan, Peter Reichl
CDC
2009
IEEE
137views Control Systems» more  CDC 2009»
14 years 13 days ago
Control of ramp-up current profile dynamics in tokamak plasmas via the minimal-surface theory
The central task of current profile control during the ramp-up phase of a tokamak discharge is to find the actuator trajectories that are necessary to achieve certain desired curre...
Chao Xu, Eugenio Schuster
BMCBI
2010
121views more  BMCBI 2010»
13 years 5 months ago
Computing DNA duplex instability profiles efficiently with a two-state model: trends of promoters and binding sites
Background: DNA instability profiles have been used recently for predicting the transcriptional start site and the location of core promoters, and to gain insight into promoter ac...
Miriam R. Kantorovitz, Zoi Rapti, Vladimir Gelev, ...