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RSA
2002
73views more  RSA 2002»
13 years 7 months ago
New and faster filters for multiple approximate string matching
We present three new algorithms for on-line multiple string matching allowing errors. These are extensions of previous algorithms that search for a single pattern. The average run...
Ricardo A. Baeza-Yates, Gonzalo Navarro
ENC
2005
IEEE
14 years 1 months ago
Combining Structural and Textual Contexts for Compressing Semistructured Databases
We describe a compression technique for semistructured documents, called SCMPPM, which combines the Prediction by Partial Matching technique with Structural Contexts Model (SCM) t...
Joaquín Adiego, Pablo de la Fuente, Gonzalo...
CPM
1993
Springer
125views Combinatorics» more  CPM 1993»
13 years 11 months ago
Detecting False Matches in String Matching Algorithms
Consider a text string of length n, a pattern string of length m, and a match vector of length n which declares each location in the text to be either a mismatch (the pattern does ...
S. Muthukrishnan
CSB
2002
IEEE
221views Bioinformatics» more  CSB 2002»
14 years 13 days ago
DNA Sequence Compression Using the Burrows-Wheeler Transform
-- We investigate off-line dictionary oriented approaches to DNA sequence compression, based on the Burrows-Wheeler Transform (BWT). The preponderance of short repeating patterns i...
Donald A. Adjeroh, Yong Zhang, Amar Mukherjee, Mat...
BIRD
2008
Springer
119views Bioinformatics» more  BIRD 2008»
13 years 9 months ago
Implementation of a Swap Matching Algorithm Using a Graph Theoretic Model
The swap matching problem consists if finding a pattern in a text, while allowing for transpositions in the pattern. A new approach using a graph-theoretic model was presented in [...
Pavlos Antoniou, Costas S. Iliopoulos, Inuka Jayas...