The approximate string matching problem is to find all locations at which a query of length m matches a substring of a text of length n with k-or-fewer differences. Simple and prac...
To unravel the concept structure and dynamics of the bioinformatics field, we analyze a set of 7401 publications from the Web of Science and MEDLINE databases, publication years 1...
Bart De Moor, Frizo A. L. Janssens, Wolfgang Gl&au...
This paper presents a new approach to identifying concepts expressed in a collection of email messages, and organizing them into an ontology or taxonomy for browsing. It incorpora...
Network alignments are extensively used for comparing, exploring, and predicting biological networks. Existing alignment tools are mostly based on isomorphic and homeomorphic embe...
Qiong Cheng, Piotr Berman, Robert W. Harrison, Ale...
Modern deep packet inspection systems use regular expressions to define various patterns of interest in network data streams. Deterministic Finite Automata (DFA) are commonly used...