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» Patterns for decoupling data structures and algorithms
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BMCBI
2006
170views more  BMCBI 2006»
13 years 7 months ago
Biclustering of gene expression data by non-smooth non-negative matrix factorization
Background: The extended use of microarray technologies has enabled the generation and accumulation of gene expression datasets that contain expression levels of thousands of gene...
Pedro Carmona-Saez, Roberto D. Pascual-Marqui, Fra...
PCI
2005
Springer
14 years 1 months ago
Protein Classification with Multiple Algorithms
Nowadays, the number of protein sequences being stored in central protein databases from labs all over the world is constantly increasing. From these proteins only a fraction has b...
Sotiris Diplaris, Grigorios Tsoumakas, Pericles A....
MCS
2001
Springer
14 years 9 hour ago
Finding Consistent Clusters in Data Partitions
Abstract. Given an arbitrary data set, to which no particular parametrical, statistical or geometrical structure can be assumed, different clustering algorithms will in general pr...
Ana L. N. Fred
IPPS
2009
IEEE
14 years 2 months ago
Dynamic parallelization for RNA structure comparison
In this paper we describe the parallelization of a dynamic programming algorithm used to find common RNA secondary structures including pseudoknots and similar structures. The se...
Eric Snow, Eric Aubanel, Patricia Evans
CIKM
2006
Springer
13 years 11 months ago
TRIPS and TIDES: new algorithms for tree mining
Recent research in data mining has progressed from mining frequent itemsets to more general and structured patterns like trees and graphs. In this paper, we address the problem of...
Shirish Tatikonda, Srinivasan Parthasarathy, Tahsi...