NAMD† is a portable parallel application for biomolecular simulations. NAMD pioneered the use of hybrid spatial and force decomposition, a technique now used by most scalable pr...
Abhinav Bhatele, Sameer Kumar, Chao Mei, James C. ...
This paper describes our procedure and a software application for conducting large parameter sweep experiments in genetic and evolutionary computation research. Both procedure and...
Michael E. Samples, Jason M. Daida, Matthew J. Byo...
It is often difficult to perform efficiently a collection of jobs with complex job dependencies due to temporal unpredictability of the grid. One way to mitigate the unpredictabili...
Grzegorz Malewicz, Ian T. Foster, Arnold L. Rosenb...
Abstract—We first present a problem called precedence constrained two traveling salesman (PC2TSP). We propose a nearoptimal heuristic to PC2TSP to generate tours by clustering p...
The growth in complexity of modern systems makes it increasingly difficult to extract high-performance. The software stacks for such systems typically consist of multiple layers a...