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» Performance Analysis of Sequence Alignment Applications
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BMCBI
2011
13 years 3 months ago
Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars
Background: The prediction of the structure of large RNAs remains a particular challenge in bioinformatics, due to the computational complexity and low levels of accuracy of state...
Zsuzsanna Sukosd, Bjarne Knudsen, Morten Vaerum, J...
SIGMOD
2010
ACM
321views Database» more  SIGMOD 2010»
14 years 1 months ago
HadoopDB in action: building real world applications
HadoopDB is a hybrid of MapReduce and DBMS technologies, designed to meet the growing demand of analyzing massive datasets on very large clusters of machines. Our previous work ha...
Azza Abouzied, Kamil Bajda-Pawlikowski, Jiewen Hua...
DAS
2010
Springer
14 years 1 months ago
Towards more effective distance functions for word image matching
Matching word images has many applications in document recognition and retrieval systems. Dynamic Time Warping (DTW) is popularly used to estimate the similarity between word imag...
Raman Jain, C. V. Jawahar
MSV
2004
13 years 10 months ago
MABAC - Matrix Based Clustering Algorithm
Clustering is a prominent method in the data mining field. It is a discovery process that groups data such that intra cluster similarity is maximized and the inter cluster similar...
Yonghui Chen, Alan P. Sprague, Kevin D. Reilly
CF
2007
ACM
14 years 1 months ago
Parallel genomic sequence-search on a massively parallel system
In the life sciences, genomic databases for sequence search have been growing exponentially in size. As a result, faster sequencesearch algorithms to search these databases contin...
Oystein Thorsen, Brian E. Smith, Carlos P. Sosa, K...