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» Performance Analysis of Sequence Alignment Applications
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CGO
2008
IEEE
15 years 9 months ago
Prediction and trace compression of data access addresses through nested loop recognition
This paper describes an algorithm that takes a trace (i.e., a sequence of numbers or vectors of numbers) as input, and from that produces a sequence of loop nests that, when run, ...
Alain Ketterlin, Philippe Clauss
BMCBI
2010
138views more  BMCBI 2010»
15 years 2 months ago
A database and API for variation, dense genotyping and resequencing data
Background: Advances in sequencing and genotyping technologies are leading to the widespread availability of multi-species variation data, dense genotype data and large-scale rese...
Daniel Rios, William M. McLaren, Yuan Chen, Ewan B...
BMCBI
2006
130views more  BMCBI 2006»
15 years 2 months ago
An accurate and interpretable model for siRNA efficacy prediction
Background: The use of exogenous small interfering RNAs (siRNAs) for gene silencing has quickly become a widespread molecular tool providing a powerful means for gene functional s...
Jean-Philippe Vert, Nicolas Foveau, Christian Laja...
168
Voted
BMCBI
2011
14 years 9 months ago
Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in i
Background: In the last decades, microarray technology has spread, leading to a dramatic increase of publicly available datasets. The first statistical tools developed were focuse...
Paolo G. V. Martini, Davide Risso, Gabriele Sales,...
131
Voted
ICIP
2004
IEEE
16 years 4 months ago
Robust motion-based image segmentation using fusion
To support real-time tracking of objects in video sequences, there has been considerable effort directed at developing optical flow and general motion-based image segmentation alg...
Michael E. Farmer, Xiaoguang Lu, Hong Chen, Anil K...