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ISCI
2011
14 years 10 months ago
Rational Research model for ranking semantic entities
—Ranking plays important roles in contemporary Internet and vertical search engines. Among existing ranking algorithms, link analysis based algorithms have been proved as effecti...
Wang Wei, Payam M. Barnaghi, Andrzej Bargiela
132
Voted
BMCBI
2006
120views more  BMCBI 2006»
15 years 3 months ago
Optimizing amino acid substitution matrices with a local alignment kernel
Background: Detecting remote homologies by direct comparison of protein sequences remains a challenging task. We had previously developed a similarity score between sequences, cal...
Hiroto Saigo, Jean-Philippe Vert, Tatsuya Akutsu
SIGMOD
2007
ACM
121views Database» more  SIGMOD 2007»
16 years 3 months ago
EaseDB: a cache-oblivious in-memory query processor
We propose to demonstrate EaseDB, the first cache-oblivious query processor for in-memory relational query processing. The cacheoblivious notion from the theory community refers t...
Bingsheng He, Yinan Li, Qiong Luo, Dongqing Yang
CNSR
2007
IEEE
174views Communications» more  CNSR 2007»
15 years 10 months ago
A New Rate-based Active Queue Management: Adaptive Virtual Queue RED
In an effort to improve performance of congested gateways, a new Active Queue Management (AQM) algorithm, Adaptive Virtual Queue Random Early Detection (AVQRED), was developed by ...
Do J. Byun, John S. Baras
140
Voted
CIBCB
2009
IEEE
15 years 4 months ago
rnaDesign: Local search for RNA secondary structure design
Abstract-- The RNA secondary structure design (SSD) problem is a recently emerging research topic motivated by applications such as customized drug design and the self-assembly of ...
Denny C. Dai, Herbert H. Tsang, Kay C. Wiese