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BMCBI
2010
108views more  BMCBI 2010»
13 years 7 months ago
iGTP: A software package for large-scale gene tree parsimony analysis
Background: The ever-increasing wealth of genomic sequence information provides an unprecedented opportunity for large-scale phylogenetic analysis. However, species phylogeny infe...
Ruchi Chaudhary, Mukul S. Bansal, André Weh...
BMCBI
2010
121views more  BMCBI 2010»
13 years 5 months ago
Computing DNA duplex instability profiles efficiently with a two-state model: trends of promoters and binding sites
Background: DNA instability profiles have been used recently for predicting the transcriptional start site and the location of core promoters, and to gain insight into promoter ac...
Miriam R. Kantorovitz, Zoi Rapti, Vladimir Gelev, ...
TSP
2010
13 years 2 months ago
Sequential and cooperative sensing for multi-channel cognitive radios
Effective spectrum sensing is a critical prerequisite for multi-channel cognitive radio (CR) networks, where multiple spectrum bands are sensed to identify transmission opportuniti...
Seung-Jun Kim, Georgios B. Giannakis
APSEC
2010
IEEE
12 years 11 months ago
Evaluating Cloud Platform Architecture with the CARE Framework
There is an emergence of cloud application platforms such as Microsoft’s Azure, Google’s App Engine and Amazon’s EC2/SimpleDB/S3. Startups and Enterprise alike, lured by the...
Liang Zhao, Anna Liu, Jacky Keung
BMCBI
2011
12 years 11 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes