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BMCBI
2011
13 years 17 days ago
Clustering gene expression data with a penalized graph-based metric
Background: The search for cluster structure in microarray datasets is a base problem for the so-called “-omic sciences”. A difficult problem in clustering is how to handle da...
Ariel E. Bayá, Pablo M. Granitto
BMCBI
2004
169views more  BMCBI 2004»
13 years 8 months ago
A power law global error model for the identification of differentially expressed genes in microarray data
Background: High-density oligonucleotide microarray technology enables the discovery of genes that are transcriptionally modulated in different biological samples due to physiolog...
Norman Pavelka, Mattia Pelizzola, Caterina Vizzard...
ICFP
2007
ACM
14 years 9 months ago
Call-pattern specialisation for haskell programs
User-defined data types, pattern-matching, and recursion are ubiquitous features of Haskell programs. Sometimes a function is called with arguments that are statically known to be...
Simon L. Peyton Jones
ISESE
2006
IEEE
14 years 3 months ago
Identifying domain-specific defect classes using inspections and change history
We present an iterative, reading-based methodology for analyzing defects in source code when change history is available. Our bottom-up approach can be applied to build knowledge ...
Taiga Nakamura, Lorin Hochstein, Victor R. Basili
BMCBI
2005
104views more  BMCBI 2005»
13 years 8 months ago
Scoring functions for transcription factor binding site prediction
Background: Transcription factor binding site (TFBS) prediction is a difficult problem, which requires a good scoring function to discriminate between real binding sites and backg...
Markus T. Friberg, Peter von Rohr, Gaston H. Gonne...