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BMCBI
2008
130views more  BMCBI 2008»
15 years 4 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
WWW
2002
ACM
16 years 5 months ago
Clustering for opportunistic communication
We describe ongoing work on I2I, a system aimed at fostering opportunistic communication among users viewing or manipulating content on the Web and in productivity applications. U...
Jay Budzik, Shannon Bradshaw, Xiaobin Fu, Kristian...
NAR
1998
122views more  NAR 1998»
15 years 4 months ago
The PIR-International Protein Sequence Database
The Protein Information Resource (PIR; http://wwwnbrf.georgetown.edu/pir/ ) supports research on molecular evolution, functional genomics, and computational biology by maintaining...
Winona C. Barker, John S. Garavelli, Daniel H. Haf...
NAR
2006
177views more  NAR 2006»
15 years 4 months ago
PUMA2 - grid-based high-throughput analysis of genomes and metabolic pathways
The PUMA2 system (available at http://compbio.mcs. 10 anl.gov/puma2) is an interactive, integrated bioinformatics environment for high-throughput genetic sequence analysis and met...
Natalia Maltsev, Elizabeth M. Glass, Dinanath Sula...
ESWS
2009
Springer
15 years 11 months ago
ONKI SKOS Server for Publishing and Utilizing SKOS Vocabularies and Ontologies as Services
Vocabularies are the building blocks of the Semantic Web providing shared terminological resources for content indexing, information retrieval, data exchange, and content integrati...
Jouni Tuominen, Matias Frosterus, Kim Viljanen, Ee...