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» Petascale computing with accelerators
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IPPS
2007
IEEE
14 years 4 months ago
High Performance Database Searching with HMMer on FPGAs
1 Profile Hidden Markov Models (profile HMMs) are used as a popular bioinformatics tool for sensitive database searching, e.g. a set of not annotated protein sequences is compared...
Timothy F. Oliver, Leow Yuan Yeow, Bertil Schmidt
IPPS
2007
IEEE
14 years 4 months ago
Cluster-dot Screening by Local Exhaustive Search with Hardware Accelaration
Screening is an important task to convert a continuoustone image into a binary image with pure black and white pixels. The main contribution of this paper is to show a new algorit...
Yasuaki Ito, Koji Nakano
RTCSA
2007
IEEE
14 years 4 months ago
Fast Schedulability Analysis Using Commodity Graphics Hardware
In this paper we explore the possibility of using commodity graphics processing units (GPUs) to speedup standard schedulability analysis algorithms. Our long-term goal is to explo...
Jimin Feng, Samarjit Chakraborty, Bertil Schmidt, ...
ICCS
2007
Springer
14 years 4 months ago
Complexity of Monte Carlo Algorithms for a Class of Integral Equations
In this work we study the computational complexity of a class of grid Monte Carlo algorithms for integral equations. The idea of the algorithms consists in an approximation of the ...
Ivan Dimov, Rayna Georgieva
CGI
2006
IEEE
14 years 4 months ago
Real-Time Rendering of Point Based Water Surfaces
Abstract. In recent years, attention has been paid to particle-based fluid simulation, with several methods being developed to incorporate particle-based simulation into CG animat...
Kei Iwasaki, Yoshinori Dobashi, Fujiichi Yoshimoto...