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» Petri Net Based Model Validation in Systems Biology
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BMCBI
2007
165views more  BMCBI 2007»
13 years 7 months ago
Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
Carlos Rodríguez Penagos, Heladia Salgado, ...
ESANN
2008
13 years 8 months ago
A method for robust variable selection with significance assessment
Our goal is proposing an unbiased framework for gene expression analysis based on variable selection combined with a significance assessment step. We start by discussing the need ...
Annalisa Barla, Sofia Mosci, Lorenzo Rosasco, Ales...
ASAP
2009
IEEE
141views Hardware» more  ASAP 2009»
14 years 4 months ago
Accelerating a Virtual Ecology Model with FPGAs
—This paper describes the acceleration of virtual ecology models using field-programmable gate arrays (FPGAs). Our approach targets models generated by the Virtual Ecology Workb...
Julien Lamoureux, Tony Field, Wayne Luk
EVOW
2009
Springer
13 years 5 months ago
Evolutionary Approaches for Strain Optimization Using Dynamic Models under a Metabolic Engineering Perspective
One of the purposes of Systems Biology is the quantitative modeling of biochemical networks. In this effort, the use of dynamical mathematical models provides for powerful tools in...
Pedro Evangelista, Isabel Rocha, Eugénio C....
PREMI
2007
Springer
14 years 1 months ago
Discovery of Process Models from Data and Domain Knowledge: A Rough-Granular Approach
The rapid expansion of the Internet has resulted not only in the ever-growing amount of data stored therein, but also in the burgeoning complexity of the concepts and phenomena per...
Andrzej Skowron