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» Phase4: Automatic Evaluation of Database Search Methods
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ICML
2005
IEEE
16 years 5 months ago
Unsupervised evidence integration
Many biological propositions can be supported by a variety of different types of evidence. It is often useful to collect together large numbers of such propositions, together with...
Philip M. Long, Vinay Varadan, Sarah Gilman, Mark ...
AAAI
2010
15 years 5 months ago
Searching Without a Heuristic: Efficient Use of Abstraction
g Without a Heuristic: Efficient Use of Abstraction Bradford Larsen, Ethan Burns, Wheeler Ruml Department of Computer Science University of New Hampshire Durham, NH 03824 USA blars...
Bradford John Larsen, Ethan Burns, Wheeler Ruml, R...
JCB
2002
116views more  JCB 2002»
15 years 4 months ago
A Novel Approach to Remote Homology Detection: Jumping Alignments
We describe a new algorithm for protein classi cation and the detection of remote homologs. The rationale is to exploit both vertical and horizontal information of a multiple alig...
Rainer Spang, Marc Rehmsmeier, Jens Stoye
BMCBI
2008
142views more  BMCBI 2008»
15 years 4 months ago
Optimal neighborhood indexing for protein similarity search
Background: Similarity inference, one of the main bioinformatics tasks, has to face an exponential growth of the biological data. A classical approach used to cope with this data ...
Pierre Peterlongo, Laurent Noé, Dominique L...
RTA
2009
Springer
15 years 10 months ago
Loops under Strategies
Most techniques to automatically disprove termination of term rewrite systems search for a loop. Whereas a loop implies nontermination for full rewriting, this is not necessarily t...
René Thiemann, Christian Sternagel