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BIRD
2008
Springer
13 years 10 months ago
Efficient Seeding Techniques for Protein Similarity Search
Abstract. We apply the concept of subset seeds proposed in [1] to similarity search in protein sequences. The main question studied is the design of efficient seed alphabets to con...
Mikhail A. Roytberg, Anna Gambin, Laurent No&eacut...
CIBB
2008
13 years 10 months ago
Unsupervised Stability-Based Ensembles to Discover Reliable Structures in Complex Bio-molecular Data
The assessment of the reliability of clusters discovered in bio-molecular data is a central issue in several bioinformatics problems. Several methods based on the concept of stabil...
Alberto Bertoni, Giorgio Valentini
CIKM
2008
Springer
13 years 10 months ago
A system for finding biological entities that satisfy certain conditions from texts
Finding biological entities (such as genes or proteins) that satisfy certain conditions from texts is an important and challenging task in biomedical information retrieval and tex...
Wei Zhou, Clement T. Yu, Weiyi Meng
CIKM
2008
Springer
13 years 10 months ago
Mining conceptual graphs for knowledge acquisition
This work addresses the use of computational linguistic analysis techniques for conceptual graphs learning from unstructured texts. A technique including both content mining and i...
Milagros Fernández, Eric Villemonte de la C...
ECLIPSE
2005
ACM
13 years 10 months ago
NaCIN: an Eclipse plug-in for program navigation-based concern inference
In this paper we describe NaCIN, an Eclipse plug-in that records a developer’s code navigation activity and produces sets of elements potentially implementing different concerns...
Imran Majid, Martin P. Robillard