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BMCBI
2010
163views more  BMCBI 2010»
15 years 4 months ago
Reduced representation of protein structure: implications on efficiency and scope of detection of structural similarity
Background: Computational comparison of two protein structures is the starting point of many methods that build on existing knowledge, such as structure modeling (including modeli...
Zong Hong Zhang, Hwee Kuan Lee, Ivana Mihalek
BMCBI
2006
137views more  BMCBI 2006»
15 years 4 months ago
Chaos game representation for comparison of whole genomes
Background: Chaos game representation of genome sequences has been used for visual representation of genome sequence patterns as well as alignment-free comparisons of sequences ba...
Jijoy Joseph, Roschen Sasikumar
KDD
2007
ACM
112views Data Mining» more  KDD 2007»
16 years 4 months ago
Statistical change detection for multi-dimensional data
This paper deals with detecting change of distribution in multi-dimensional data sets. For a given baseline data set and a set of newly observed data points, we define a statistic...
Xiuyao Song, Mingxi Wu, Christopher M. Jermaine, S...
WABI
2001
Springer
162views Bioinformatics» more  WABI 2001»
15 years 8 months ago
A Simple Hyper-Geometric Approach for Discovering Putative Transcription Factor Binding Sites
A central issue in molecular biology is understanding the regulatory mechanisms that control gene expression. The recent flood of genomic and postgenomic data opens the way for co...
Yoseph Barash, Gill Bejerano, Nir Friedman
TCS
2008
15 years 4 months ago
The role of information in the cop-robber game
We investigate the role of the information available to the players on the outcome of the cops and robbers game. This game takes place on a graph and players move along the edges ...
Volkan Isler, Nikhil Karnad