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» Practical Compressed Suffix Trees
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CPM
1999
Springer
144views Combinatorics» more  CPM 1999»
14 years 25 days ago
Ziv Lempel Compression of Huge Natural Language Data Tries Using Suffix Arrays
We present a very efficient, in terms of space and access speed, data structure for storing huge natural language data sets. The structure is described as LZ (Ziv Lempel) compresse...
Strahil Ristov, Eric Laporte
IR
2008
13 years 8 months ago
A compressed self-index using a Ziv-Lempel dictionary
A compressed full-text self-index for a text T , of size u, is a data structure used to search for patterns P, of size m, in T , that requires reduced space, i.e. space that depend...
Luís M. S. Russo, Arlindo L. Oliveira
CSB
2002
IEEE
221views Bioinformatics» more  CSB 2002»
14 years 1 months ago
DNA Sequence Compression Using the Burrows-Wheeler Transform
-- We investigate off-line dictionary oriented approaches to DNA sequence compression, based on the Burrows-Wheeler Transform (BWT). The preponderance of short repeating patterns i...
Donald A. Adjeroh, Yong Zhang, Amar Mukherjee, Mat...
EDBT
2010
ACM
155views Database» more  EDBT 2010»
13 years 12 months ago
Suffix tree construction algorithms on modern hardware
Suffix trees are indexing structures that enhance the performance of numerous string processing algorithms. In this paper, we propose cache-conscious suffix tree construction algo...
Dimitris Tsirogiannis, Nick Koudas
DCC
1998
IEEE
14 years 25 days ago
The Context Trees of Block Sorting Compression
Abstract. The Burrows-Wheeler transform (BWT) and block sorting compression are closely related to the context trees of PPM. The usual approach of treating BWT as merely a permutat...
N. Jesper Larsson