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BMCBI
2006
143views more  BMCBI 2006»
15 years 3 months ago
Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction
Background: One of the most powerful methods for the prediction of protein structure from sequence information alone is the iterative construction of profile-type models. Because ...
Eric D. Scheeff, Philip E. Bourne
116
Voted
BMCBI
2010
150views more  BMCBI 2010»
15 years 3 months ago
AMS 3.0: prediction of post-translational modifications
Background: We present here the recent update of AMS algorithm for identification of post-translational modification (PTM) sites in proteins based only on sequence information, us...
Subhadip Basu, Dariusz Plewczynski
RECOMB
2008
Springer
16 years 3 months ago
Rapid and Accurate Protein Side Chain Prediction with Local Backbone Information
High-accuracy protein structure modeling demands accurate and very fast side chain prediction since such a procedure must be repeatedly called at each step of structure refinement....
Jing Zhang, Xin Gao, Jinbo Xu, Ming Li
122
Voted
ISORC
1998
IEEE
15 years 7 months ago
Compositional Specification and Structured Verification of Hybrid Systems in cTLA
Many modern chemical plants have to be modelled as complex hybrid systems consisting of various continuous and event-discrete components. Besides of the modular and easy-to-read s...
Peter Herrmann, Günter Graw, Heiko Krumm
BMCBI
2008
116views more  BMCBI 2008»
15 years 3 months ago
Impact of residue accessible surface area on the prediction of protein secondary structures
Background: The problem of accurate prediction of protein secondary structure continues to be one of the challenging problems in Bioinformatics. It has been previously suggested t...
Amir Momen-Roknabadi, Mehdi Sadeghi, Hamid Pezeshk...