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» Predicting Peroxisomal Proteins
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NAR
2006
84views more  NAR 2006»
13 years 8 months ago
PHEPS: web-based pH-dependent Protein Electrostatics Server
PHEPS (pH-dependent Protein Electrostatics Server) is a web service for fast prediction and experiment planning support, as well as for correlation and analysis of experimentally ...
Alexander A. Kantardjiev, Boris P. Atanasov
GECCO
2007
Springer
165views Optimization» more  GECCO 2007»
14 years 2 months ago
Peptide detectability following ESI mass spectrometry: prediction using genetic programming
The accurate quantification of proteins is important in several areas of cell biology, biotechnology and medicine. Both relative and absolute quantification of proteins is often d...
David C. Wedge, Simon J. Gaskell, Simon J. Hubbard...
BMCBI
2010
150views more  BMCBI 2010»
13 years 8 months ago
MCL-CAw: a refinement of MCL for detecting yeast complexes from weighted PPI networks by incorporating core-attachment structure
Background: The reconstruction of protein complexes from the physical interactome of organisms serves as a building block towards understanding the higher level organization of th...
Sriganesh Srihari, Kang Ning, Hon Wai Leong
BMCBI
2006
124views more  BMCBI 2006»
13 years 8 months ago
HybGFS: a hybrid method for genome-fingerprint scanning
Background: Protein identification based on mass spectrometry (MS) has previously been performed using peptide mass fingerprinting (PMF) or tandem MS (MS/MS) database searching. H...
Kosaku Shinoda, Nozomu Yachie, Takeshi Masuda, Nao...
BMCBI
2004
111views more  BMCBI 2004»
13 years 8 months ago
The Hotdog fold: wrapping up a superfamily of thioesterases and dehydratases
Background: The Hotdog fold was initially identified in the structure of Escherichia coli FabA and subsequently in 4-hydroxybenzoyl-CoA thioesterase from Pseudomonas sp. strain CB...
Shane C. Dillon, Alex Bateman