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DIS
2006
Springer
14 years 2 months ago
Prediction of Domain-Domain Interactions Using Inductive Logic Programming from Multiple Genome Databases
Protein domains are the building blocks of proteins, and their interactions are crucial in forming stable protein-protein interactions (PPI) and take part in many cellular processe...
Thanh Phuong Nguyen, Tu Bao Ho
BMCBI
2010
179views more  BMCBI 2010»
13 years 11 months ago
A semi-supervised learning approach to predict synthetic genetic interactions by combining functional and topological properties
Background: Genetic interaction profiles are highly informative and helpful for understanding the functional linkages between genes, and therefore have been extensively exploited ...
Zhuhong You, Zheng Yin, Kyungsook Han, De-Shuang H...
SIGSOFT
2003
ACM
14 years 11 months ago
Runtime safety analysis of multithreaded programs
Foundational and scalable techniques for runtime safety analysis of multithreaded programs are explored in this paper. A technique based on vector clocks to extract the causal dep...
Koushik Sen, Grigore Rosu, Gul Agha
ACMMSP
2004
ACM
131views Hardware» more  ACMMSP 2004»
14 years 4 months ago
Reuse-distance-based miss-rate prediction on a per instruction basis
Feedback-directed optimization has become an increasingly important tool in designing and building optimizing compilers. Recently, reuse-distance analysis has shown much promise i...
Changpeng Fang, Steve Carr, Soner Önder, Zhen...
BMCBI
2006
108views more  BMCBI 2006»
13 years 11 months ago
Promoter prediction and annotation of microbial genomes based on DNA sequence and structural responses to superhelical stress
Background: In our previous studies, we found that the sites in prokaryotic genomes which are most susceptible to duplex destabilization under the negative superhelical stresses t...
Huiquan Wang, Craig J. Benham