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BIBE
2003
IEEE
121views Bioinformatics» more  BIBE 2003»
14 years 20 days ago
Time Series Analysis of Gene Expression and Location Data
We develop a method for integrating time series expression profiles and factor-gene binding data to quantify dynamic aspects of gene regulation. We estimate latencies for transcr...
Chen-Hsiang Yeang, Tommi Jaakkola
ICASSP
2008
IEEE
14 years 1 months ago
Probabilistic framework for gene expression clustering validation based on gene ontology and graph theory
Based on the correlation between expression and ontologydriven gene similarity, we incorporate functional annotations into gene expression clustering validation. A probabilistic f...
Yinyin Yuan, Chang-Tsun Li
BMCBI
2008
114views more  BMCBI 2008»
13 years 7 months ago
TiGER: A database for tissue-specific gene expression and regulation
Background: Understanding how genes are expressed and regulated in different tissues is a fundamental and challenging question. However, most of currently available biological dat...
Xiong Liu, Xueping Yu, Donald J. Zack, Heng Zhu, J...
BMCBI
2010
104views more  BMCBI 2010»
13 years 7 months ago
Response network analysis of differential gene expression in human epithelial lung cells during avian influenza infections
Background: The recent emergence of the H5N1 influenza virus from avian reservoirs has raised concern about future influenza strains of high virulence emerging that could easily i...
Ken Tatebe, Ahmet Zeytun, Ruy M. Ribeiro, Robert H...
IJCNN
2006
IEEE
14 years 1 months ago
Computational Neurogenetic Modeling: A Methodology to Study Gene Interactions Underlying Neural Oscillations
—We present new results from Computational Neurogenetic Modeling to aid discoveries of complex gene interactions underlying oscillations in neural systems. Interactions of genes ...
Lubica Benuskova, Simei Gomes Wysoski, Nikola K. K...