Sciweavers

258 search results - page 12 / 52
» Predicting protein folding pathways
Sort
View
AI
2003
Springer
14 years 2 months ago
An Improved Ant Colony Optimisation Algorithm for the 2D HP Protein Folding Problem
The prediction of a protein’s structure from its amino-acid sequence is one of the most important problems in computational biology. In the current focus on a widely studied abst...
Alena Shmygelska, Holger H. Hoos
BMCBI
2006
125views more  BMCBI 2006»
13 years 9 months ago
Automated functional classification of experimental and predicted protein structures
Background: Proteins that are similar in sequence or structure may perform different functions in nature. In such cases, function cannot be inferred from sequence or structural si...
Kai Wang, Ram Samudrala
GCB
1997
Springer
74views Biometrics» more  GCB 1997»
14 years 1 months ago
Using constraint programming for lattice protein folding
We present a global search technique for nding the global minimal conformation of a sequence in Dill's HP-lattice model5;6 . The HP-lattice model is a simpli ed model of prot...
Rolf Backofen
BMCBI
2005
152views more  BMCBI 2005»
13 years 9 months ago
An ant colony optimisation algorithm for the 2D and 3D hydrophobic polar protein folding problem
Background: The protein folding problem is a fundamental problems in computational molecular biology and biochemical physics. Various optimisation methods have been applied to for...
Alena Shmygelska, Holger H. Hoos
ICPR
2008
IEEE
14 years 10 months ago
Fast protein homology and fold detection with sparse spatial sample kernels
In this work we present a new string similarity feature, the sparse spatial sample (SSS). An SSS is a set of short substrings at specific spatial displacements contained in the or...
Pai-Hsi Huang, Pavel P. Kuksa, Vladimir Pavlovic