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» Predicting protein functions with message passing algorithms
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BMCBI
2004
151views more  BMCBI 2004»
15 years 3 months ago
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics
Background: The general problem of RNA secondary structure prediction under the widely used thermodynamic model is known to be NP-complete when the structures considered include a...
Jens Reeder, Robert Giegerich
ICDM
2006
IEEE
138views Data Mining» more  ICDM 2006»
15 years 9 months ago
Belief Propagation in Large, Highly Connected Graphs for 3D Part-Based Object Recognition
We describe a part-based object-recognition framework, specialized to mining complex 3D objects from detailed 3D images. Objects are modeled as a collection of parts together with...
Frank DiMaio, Jude W. Shavlik
131
Voted
CISS
2008
IEEE
15 years 10 months ago
The Chinese Generals Problem
Abstract—To achieve higher reliability, safety, and faulttolerance, many mission-critical detection and decision systems implement consensus algorithms that force the systems’ ...
Edwin Soedarmadji
TPDS
2010
93views more  TPDS 2010»
15 years 2 months ago
Self-Consistent MPI Performance Guidelines
Message passing using the Message Passing Interface (MPI) is at present the most widely adopted framework for programming parallel applications for distributed-memory and clustere...
Jesper Larsson Träff, William D. Gropp, Rajee...
163
Voted
IPPS
2006
IEEE
15 years 9 months ago
Multiple sequence alignment by quantum genetic algorithm
In this paper we describe a new approach for the well known problem in bioinformatics: Multiple Sequence Alignment (MSA). MSA is fundamental task as it represents an essential pla...
L. Abdesslem, M. Soham, B. Mohamed