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IJIT
2004
13 years 10 months ago
Computing Entropy for Ortholog Detection
Abstract-- Biological sequences from different species are called orthologs if they evolved from a sequence of a common ancestor species and they have the same biological function....
Hsing-Kuo Pao, John Case
BMCBI
2006
157views more  BMCBI 2006»
13 years 8 months ago
Comparison of protein interaction networks reveals species conservation and divergence
Background: Recent progresses in high-throughput proteomics have provided us with a first chance to characterize protein interaction networks (PINs), but also raised new challenge...
Zhi Liang, Meng Xu, Maikun Teng, Liwen Niu
EDBT
2009
ACM
277views Database» more  EDBT 2009»
14 years 1 months ago
G-hash: towards fast kernel-based similarity search in large graph databases
Structured data including sets, sequences, trees and graphs, pose significant challenges to fundamental aspects of data management such as efficient storage, indexing, and simila...
Xiaohong Wang, Aaron M. Smalter, Jun Huan, Gerald ...
IPSN
2009
Springer
14 years 3 months ago
Simultaneous placement and scheduling of sensors
We consider the problem of monitoring spatial phenomena, such as road speeds on a highway, using wireless sensors with limited battery life. A central question is to decide where ...
Andreas Krause, Ram Rajagopal, Anupam Gupta, Carlo...
BMCBI
2010
156views more  BMCBI 2010»
13 years 9 months ago
Mathematical model for empirically optimizing large scale production of soluble protein domains
Background: Efficient dissection of large proteins into their structural domains is critical for high throughput proteome analysis. So far, no study has focused on mathematically ...
Eisuke Chikayama, Atsushi Kurotani, Takanori Tanak...