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» Predicting the Effects of Gene Deletion
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KDD
2003
ACM
190views Data Mining» more  KDD 2003»
14 years 7 months ago
Distance-enhanced association rules for gene expression
We introduce a novel data mining technique for the analysis of gene expression. Gene expression is the effective production of the protein that a gene encodes. We focus on the cha...
Aleksandar Icev, Carolina Ruiz, Elizabeth F. Ryder
BMCBI
2004
91views more  BMCBI 2004»
13 years 7 months ago
SIGI: score-based identification of genomic islands
Background: Genomic islands can be observed in many microbial genomes. These stretches of DNA have a conspicuous composition with regard to sequence or encoded functions. Genomic ...
Rainer Merkl
ICPP
2007
IEEE
14 years 1 months ago
A Meta-Learning Failure Predictor for Blue Gene/L Systems
The demand for more computational power in science and engineering has spurred the design and deployment of ever-growing cluster systems. Even though the individual components use...
Prashasta Gujrati, Yawei Li, Zhiling Lan, Rajeev T...
BMCBI
2005
79views more  BMCBI 2005»
13 years 7 months ago
Mathematical design of prokaryotic clone-based microarrays
Background: Clone-based microarrays, on which each spot represents a random genomic fragment, are a good alternative to open reading frame-based microarrays, especially for microo...
Bart Pieterse, Elisabeth J. Quirijns, Frank H. J. ...
BMCBI
2006
130views more  BMCBI 2006»
13 years 7 months ago
An accurate and interpretable model for siRNA efficacy prediction
Background: The use of exogenous small interfering RNAs (siRNAs) for gene silencing has quickly become a widespread molecular tool providing a powerful means for gene functional s...
Jean-Philippe Vert, Nicolas Foveau, Christian Laja...