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» Predicting the beta-helix fold from protein sequence data
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PRIB
2009
Springer
209views Bioinformatics» more  PRIB 2009»
14 years 2 months ago
Class Prediction from Disparate Biological Data Sources Using an Iterative Multi-Kernel Algorithm
For many biomedical modelling tasks a number of different types of data may influence predictions made by the model. An established approach to pursuing supervised learning with ...
Yiming Ying, Colin Campbell, Theodoros Damoulas, M...
BMCBI
2006
132views more  BMCBI 2006»
13 years 7 months ago
Length-dependent prediction of protein intrinsic disorder
Background: Due to the functional importance of intrinsically disordered proteins or protein regions, prediction of intrinsic protein disorder from amino acid sequence has become ...
Kang Peng, Predrag Radivojac, Slobodan Vucetic, A....
BMCBI
2006
165views more  BMCBI 2006»
13 years 7 months ago
Improving the quality of protein structure models by selecting from alignment alternatives
Background: In the area of protein structure prediction, recently a lot of effort has gone into the development of Model Quality Assessment Programs (MQAPs). MQAPs distinguish hig...
Ingolf Sommer, Stefano Toppo, Oliver Sander, Thoma...
WABI
2007
Springer
14 years 1 months ago
Predicting Protein Folding Kinetics Via Temporal Logic Model Checking
Christopher James Langmead⋆ and Sumit Kumar Jha Department of Computer Science, Carnegie Mellon University We present a novel approach for predicting protein folding kinetics us...
Christopher James Langmead, Sumit Kumar Jha
BMCBI
2008
104views more  BMCBI 2008»
13 years 7 months ago
Evolutionary Pareto-optimization of stably folding peptides
Background: As a rule, peptides are more flexible and unstructured than proteins with their substantial stabilizing hydrophobic cores. Nevertheless, a few stably folding peptides ...
Wolfram Gronwald, Tim Hohm, Daniel Hoffmann