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GECCO
2007
Springer
162views Optimization» more  GECCO 2007»
14 years 1 months ago
Using pair approximations to predict takeover dynamics in spatially structured populations
The topological properties of a network directly impact the flow of information through a system. For example, in natural populations, the network of inter-individual contacts aff...
Joshua L. Payne, Margaret J. Eppstein
BMCBI
2010
208views more  BMCBI 2010»
13 years 7 months ago
Using machine learning to speed up manual image annotation: application to a 3D imaging protocol for measuring single cell gene
Background: Image analysis is an essential component in many biological experiments that study gene expression, cell cycle progression, and protein localization. A protocol for tr...
Zafer Aydin, John I. Murray, Robert H. Waterston, ...
JSS
2008
97views more  JSS 2008»
13 years 7 months ago
Proactive and reactive multi-dimensional histogram maintenance for selectivity estimation
Many state-of-the-art selectivity estimation methods use query feedback to maintain histogram buckets, thereby using the limited memory efficiently. However, they are "reacti...
Zhen He, Byung Suk Lee, Xiaoyang Sean Wang
BMCBI
2011
12 years 11 months ago
Binding Site Prediction for Protein-Protein Interactions and Novel Motif Discovery using Re-occurring Polypeptide Sequences
Background: While there are many methods for predicting protein-protein interaction, very few can determine the specific site of interaction on each protein. Characterization of t...
Adam Amos-Binks, Catalin Patulea, Sylvain Pitre, A...
BMCBI
2008
175views more  BMCBI 2008»
13 years 7 months ago
Comprehensive inventory of protein complexes in the Protein Data Bank from consistent classification of interfaces
Background: Protein-protein interactions are ubiquitous and essential for all cellular processes. High-resolution X-ray crystallographic structures of protein complexes can reveal...
Andrew J. Bordner, Andrey A. Gorin