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» Prediction of indirect interactions in proteins
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BIOINFORMATICS
2010
74views more  BIOINFORMATICS 2010»
13 years 7 months ago
Semi-supervised multi-task learning for predicting interactions between HIV-1 and human proteins
Yanjun Qi, Oznur Tastan, Jaime G. Carbonell, Judit...
BIOINFORMATICS
2006
53views more  BIOINFORMATICS 2006»
13 years 7 months ago
Predicting interactions in protein networks by completing defective cliques
Haiyuan Yu, Alberto Paccanaro, Valery Trifonov, Ma...
BMCBI
2011
12 years 11 months ago
PRIN, a predicted rice interactome network
Background: Protein-protein interactions play a fundamental role in elucidating the molecular mechanisms of biomolecular function, signal transductions and metabolic pathways of l...
Haibin Gu, Pengcheng Zhu, Yinming Jiao, Yijun Meng...
BIBE
2005
IEEE
154views Bioinformatics» more  BIBE 2005»
14 years 1 months ago
Effective Pre-Processing Strategies for Functional Clustering of a Protein-Protein Interactions Network
In this article we present novel preprocessing techniques, based on topological measures of the network, to identify clusters of proteins from Protein-protein interaction (PPI) ne...
Duygu Ucar, Srinivasan Parthasarathy, Sitaram Asur...
ICDM
2009
IEEE
152views Data Mining» more  ICDM 2009»
14 years 2 months ago
SLIDER: Mining Correlated Motifs in Protein-Protein Interaction Networks
Correlated motif mining (CMM) is the problem to find overrepresented pairs of patterns, called motif pairs, in interacting protein sequences. Algorithmic solutions for CMM thereb...
Peter Boyen, Frank Neven, Dries Van Dyck, Aalt-Jan...