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BMCBI
2008
105views more  BMCBI 2008»
13 years 7 months ago
Improving the prediction of mRNA extremities in the parasitic protozoan Leishmania
Background: Leishmania and other members of the Trypanosomatidae family diverged early on in eukaryotic evolution and consequently display unique cellular properties. Their appare...
Martin Smith, Mathieu Blanchette, Barbara Papadopo...
BMCBI
2006
137views more  BMCBI 2006»
13 years 7 months ago
A maximum likelihood framework for protein design
Background: The aim of protein design is to predict amino-acid sequences compatible with a given target structure. Traditionally envisioned as a purely thermodynamic question, thi...
Claudia L. Kleinman, Nicolas Rodrigue, Céci...
BMCBI
2008
101views more  BMCBI 2008»
13 years 7 months ago
Reranking candidate gene models with cross-species comparison for improved gene prediction
Background: Most gene finders score candidate gene models with state-based methods, typically HMMs, by combining local properties (coding potential, splice donor and acceptor patt...
Qian Liu, Koby Crammer, Fernando C. N. Pereira, Da...
IMA
2007
Springer
132views Cryptology» more  IMA 2007»
14 years 1 months ago
New Branch Prediction Vulnerabilities in OpenSSL and Necessary Software Countermeasures
Abstract. Software based side-channel attacks allow an unprivileged spy process to extract secret information from a victim (cryptosystem) process by exploiting some indirect leaka...
Onur Aciiçmez, Shay Gueron, Jean-Pierre Sei...
BMCBI
2008
96views more  BMCBI 2008»
13 years 7 months ago
The value of position-specific scoring matrices for assessment of protein allegenicity
Background: Bioinformatics tools are commonly used for assessing potential protein allergenicity. While these methods have achieved good accuracies for highly conserved sequences,...
Shen Jean Lim, Joo Chuan Tong, Fook Tim Chew, Mart...