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CDES
2006
97views Hardware» more  CDES 2006»
13 years 9 months ago
Protein Secondary Structure Prediction Accuracy versus Reduction Methods
Predicting protein secondary structure is a key step in determining the 3D structure of a protein that determines its function. The Dictionary of Secondary Structure of Proteins (...
Saad Osman Abdalla Subair, Safaai Deris
BMCBI
2006
105views more  BMCBI 2006»
13 years 7 months ago
CRNPRED: highly accurate prediction of one-dimensional protein structures by large-scale critical random networks
Background: One-dimensional protein structures such as secondary structures or contact numbers are useful for three-dimensional structure prediction and helpful for intuitive unde...
Akira R. Kinjo, Ken Nishikawa
BMCBI
2006
242views more  BMCBI 2006»
13 years 7 months ago
Predicting residue-wise contact orders in proteins by support vector regression
Background: The residue-wise contact order (RWCO) describes the sequence separations between the residues of interest and its contacting residues in a protein sequence. It is a ne...
Jiangning Song, Kevin Burrage
ISMB
1994
13 years 8 months ago
Optimally Parsing a Sequence into Different Classes Based on Multiple Types of Evidence
Weconsider the problem of parsing a sequence into different classes of subsequences.Twocommonexamplesare finding the exons and introns in genomicsequences and identifying the seco...
Gary D. Stormo, David Haussler
BMCBI
2005
105views more  BMCBI 2005»
13 years 7 months ago
Secondary structure assignment that accurately reflects physical and evolutionary characteristics
Background: Secondary structure is used in hierarchical classification of protein structures, identification of protein features, such as helix caps and loops, for fold recognitio...
Maria Vittoria Cubellis, Fabien Cailliez, Simon C....