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BMCBI
2010
118views more  BMCBI 2010»
13 years 9 months ago
Computing H/D-Exchange rates of single residues from data of proteolytic fragments
Background: Protein conformation and protein/protein interaction can be elucidated by solution-phase Hydrogen/ Deuterium exchange (sHDX) coupled to high-resolution mass analysis o...
Ernst Althaus, Stefan Canzar, Carsten Ehrler, Mark...
BMCBI
2010
135views more  BMCBI 2010»
13 years 9 months ago
Quadratic variance models for adaptively preprocessing SELDI-TOF mass spectrometry data
Background: Surface enhanced laser desorption/ionization time-of-flight mass spectrometry (SELDI) is a proteomics tool for biomarker discovery and other high throughput applicatio...
Vincent A. Emanuele II, Brian M. Gurbaxani
BMCBI
2011
13 years 23 days ago
PI: An open-source software package for validation of the SEQUEST result and visualization of mass spectrum
Background: Tandem mass spectrometry (MS/MS) has emerged as the leading method for high- throughput protein identification in proteomics. Recent technological breakthroughs have d...
Yantao Qiao, Hong Zhang, Dongbo Bu, Shiwei Sun
ICPADS
2010
IEEE
13 years 7 months ago
Data-Aware Task Scheduling on Multi-accelerator Based Platforms
To fully tap into the potential of heterogeneous machines composed of multicore processors and multiple accelerators, simple offloading approaches in which the main trunk of the ap...
Cédric Augonnet, Jérôme Clet-O...
ICML
2009
IEEE
14 years 10 months ago
Prototype vector machine for large scale semi-supervised learning
Practical data mining rarely falls exactly into the supervised learning scenario. Rather, the growing amount of unlabeled data poses a big challenge to large-scale semi-supervised...
Kai Zhang, James T. Kwok, Bahram Parvin