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    NIPS
    2003
    133views Information Technology» more  NIPS 2003»
    ICA-based Clustering of Genes from Microarray Expression Data
    13 years 9 months ago
    ICA-based Clustering of Genes from Microarray Expression Data
    Download  books.nips.cc
    We propose an unsupervised methodology using independent component analysis (ICA) to cluster genes from DNA microarray data. Based on an ICA mixture model of genomic expression pa...
    Su-In Lee, Serafim Batzoglou
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    BMCBI
    2005
    201views more  BMCBI 2005»
    Principal component analysis for predicting transcription-factor binding motifs from array-derived data
    13 years 7 months ago
    Principal component analysis for predicting transcription-factor binding motifs from array-derived data
    Download  www.biomedcentral.com
    Background: The responses to interleukin 1 (IL-1) in human chondrocytes constitute a complex regulatory mechanism, where multiple transcription factors interact combinatorially to...
    Yunlong Liu, Matthew P. Vincenti, Hiroki Yokota
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    BIBM
    2009
    IEEE
    172views Bioinformatics» more  BIBM 2009»
    Identifying Gene Signatures from Cancer Progression Data Using Ordinal Analysis
    14 years 29 days ago
    Identifying Gene Signatures from Cancer Progression Data Using Ordinal Analysis
    Download  vorlon.case.edu
    —A comprehensive understanding of cancer progression may shed light on genetic and molecular mechanisms of oncogenesis, and it may provide much needed information for effective d...
    Yoon Soo Pyon, Jing Li
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    BMCBI
    2005
    163views more  BMCBI 2005»
    Rank-invariant resampling based estimation of false discovery rate for analysis of small sample microarray data
    13 years 7 months ago
    Rank-invariant resampling based estimation of false discovery rate for analysis of small sample microarray data
    Download  www.biomedcentral.com
    Background: The evaluation of statistical significance has become a critical process in identifying differentially expressed genes in microarray studies. Classical p-value adjustm...
    Nitin Jain, HyungJun Cho, Michael O'Connell, Jae K...
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    BMCBI
    2010
    165views more  BMCBI 2010»
    Bayesian integrated modeling of expression data: a case study on RhoG
    13 years 8 months ago
    Bayesian integrated modeling of expression data: a case study on RhoG
    Download  www.biomedcentral.com
    Background: DNA microarrays provide an efficient method for measuring activity of genes in parallel and even covering all the known transcripts of an organism on a single array. T...
    Rashi Gupta, Dario Greco, Petri Auvinen, Elja Arja...
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